geometric machine learning gNE Python package for geometric Neighbour Embeddings markovmodus Markov-modulated simulator for single-cell RNA velocity benchmarks RNA Velocity Embeddings coming soon applied topology CoVtRec Topological surveillance of potentially adaptive mutations in the evolution of SARS‑CoV‑2 EP Math and Data STRUCTURES | Exploratory Project Mathematics and Data (2019 – present) MuRiT Ripser add-on for pathwise exploration of multi-persistence in filtered metric spaces Directed Spaces as Feature Representations Exploring the use of directed simplicial complexes to understand feature representations in neural networks. Topological Recurrence Index Persistent-homology pipeline that flags emerging adaptive mutations in viral genomes geometric analysis Covariograms on Homogeneous Spaces coming soon Haydys-Witten Instantons PhD project fun The Clacks Subscribe to authors and articles on the arxiv (& biorxiv) - coming soon Academic Family These are my academic siblings and ancestors. repositories
